Step Template to Run an R Function
step_tmpl_do_call.Rd
This step template uses a syntax similar to the base::do.call
function to
run a function as a workflow step. You must make sure that all variables
required by the function are passed to it either as one of its arguments or
loaded later by the function itself.
Step Template
Step Templates are helper functions to be used within add_workflow_step
.
Some basic ones are provided by the slurmworkflow
package. They instruct
the workflow to run either a bash script, a set of bash lines given as a
character vector or an R script.
Additional Step Templates can be created to simplify specific tasks. The
easiest way to do so is as wrappers around existing templates.